Data analysis and visualization with R

Prerequisites

Use the .prereq style to specify prerequisites.

Schedule

00:00 A brief introduction to R What is R and when should I use it?
How do I use the RStudio graphical user interface?
How do I assign variables?
How do I read tabular data into R?
What is a data frame?
How do I access subsets of a data frame?
How do I calculate simple statistics like mean and median?
Where can I get help?
How do I install a package?
How can I plot my data?
01:30 Explore a gene expression data set How do I get an overview of an RNA-seq dataset?
How do I calculate differentially expressed genes?
How do I find enriched biological processes?
02:00 Dynamic Reports with knitr How can I put my text, code, and results all in one document?
How do I use knitr?
How do I write in Markdown?
02:30 Finish